Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831243.1_cds_XP_016504444.1_17886
CDS Infomation

[gene=LOC107822417] [db_xref=GeneID:107822417] [protein=rop guanine nucleotide exchange factor 14-like] [protein_id=XP_016504444.1] [location=complement(join(8863..9246,9818..10165,10255..10524,10616..10690,10774..10928,11393..11770,13974..14049))] [gbkey=CDS]
Sequence

ATGGTACTCATGAGGAGGAGACTTGCCTGCTGTACAAGAGATAGAGAGATTAGCATTGAC
TTTGATGAAAATGAGAAAATTACAACATATGATGGCCTTGAAAGCTGTATTTTGAACAGT
CAGCCATATGACAATCAAAGTGTCACTAGCAGAGGTGACGGAGGTATTACAGATTCCTTG
GACGACGATGACTCAAGCAGCAGTTCCAGCAACAATGTTTTTGGATCTTTCTCTTCTCAC
TGGACAACAATGAAGAGGGATGATGAGTGGGATTTCTCAGCAAGCCCACAACATTACTAT
GTAAAAGAAAAACCTGCTTATGCAACCCAGTTTTCAGATGTGGAAACAATGAAAGAAAAA
TTTGCAAAATTGTTACTTGGGGAAGATGTTACTGGAGGAAGCAAGGGGATTTCCACTGCA
TTAGCACTGTCAAATGCCATTACAAATCTTGCCGCATCAGTGTTTGGAGAGCTCTGGAAA
TTGGAGCCACTTGCGGAGGATAGGAAGAGGAAATGGAAGAGAGAAATGGATTGGTTGCTC
TCTCCTACAAACCATATGATTGAGTTGGTCCCTGCTAAACAAAATGGTTCTAATGGCCAG
AAATTGGAGATCATGACTCCAAAAGCTCGTGCGGACATCCATATGAATCTTCCAGCACTT
CAGAAGTTGGACTCCATGCTTCTTGAAGCTCTGGATTCAATGGTTAATACCGAGTTTTGG
TACATGGAAGTGGGTAGCCGAGCAGAAGGAAGAAGCAGAGGTGCTGGGCAGAGCAAAAGG
TGGTGGCTTCCCTCACCCCAGGTACCCATATCTGGGCTCTCTGATCCTGAAAGAGACAAA
TTGTTGAATCAGGGTAAATTGGTGAATCAAATATTTAAAGCAGCTAAAGCTATCAATGAA
AACGTCTTGTCTGAAATGCCTGTTCCAACAATCATTACAGATGCACTTCCAAAGTCTGGC
AGGACAAGTCTAGGGGAGGAACTTTACAGGATCCTATCGGCAGAATCAACATCTGTGGAG
GCGATGTTCGTGGCCCTTAACATAAGATCTGAACACAATGCCCTTGAAGCTGTTAACAGG
TTGGAAGCAGCAATACTTGCCTGGAAAGAGAAAATAGCAGAACATGCTGGTGGAAAATCT
CCTGCACGAACATCTTGGTCTTTCATAAAAGATCCAATATCTGAACTGGACAAGGTAGAG
GTGTTATTGAGCAGAGCGGAAACTCTTCTGCTGCAGCTCAAGATTAAATATCCAAACCTT
CCTCAGACATTCCTCAATGTCACAAAGATCCAATATGGCAAGGATGTTGGACGTTCAATT
CTTGAAGCATACTCTCGGGTTCTCTTGAACTTGGCATTCTGCATCCTAACTAGGATAGGA
GAAATTCTTCAAGAAGACAACTTGAGCAATCCTAATTCACCCGCGGCTGCATGCCACCTT
CCTGGCATAAGAATTCTGGGATTGTCAGATAGTCCTATACCTAGTCGTGTGAGGCATTCA
TTAATTGATCAGATGAATAAAACTGATGAAAGATCTTGCGATTCTCGCCATACCAATGCT
TCCGATATAGACATTGAGTCTGCTGAATTGAAGATCAGTTCGGTAACTGCAACACCAAGC
AGAAGTCGAGTGTGGTGCATTGGCAGAGAAGCTTGTAGCAGCATGTCTGCTGCAAATTCA
CCTTGA

Peptide Sequence

PEP ID

XP_016504444.1
PEP Infomation

PREDICTED: rop guanine nucleotide exchange factor 14-like [Nicotiana tabacum]
Sequence

MVLMRRRLACCTRDREISIDFDENEKITTYDGLESCILNSQPYDNQSVTSRGDGGITDSL
DDDDSSSSSSNNVFGSFSSHWTTMKRDDEWDFSASPQHYYVKEKPAYATQFSDVETMKEK
FAKLLLGEDVTGGSKGISTALALSNAITNLAASVFGELWKLEPLAEDRKRKWKREMDWLL
SPTNHMIELVPAKQNGSNGQKLEIMTPKARADIHMNLPALQKLDSMLLEALDSMVNTEFW
YMEVGSRAEGRSRGAGQSKRWWLPSPQVPISGLSDPERDKLLNQGKLVNQIFKAAKAINE
NVLSEMPVPTIITDALPKSGRTSLGEELYRILSAESTSVEAMFVALNIRSEHNALEAVNR
LEAAILAWKEKIAEHAGGKSPARTSWSFIKDPISELDKVEVLLSRAETLLLQLKIKYPNL
PQTFLNVTKIQYGKDVGRSILEAYSRVLLNLAFCILTRIGEILQEDNLSNPNSPAAACHL
PGIRILGLSDSPIPSRVRHSLIDQMNKTDERSCDSRHTNASDIDIESAELKISSVTATPS
RSRVWCIGREACSSMSAANSP

Transcript Sequence

Gene sequence data has not been registered.